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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10741782 chr11:19613111 C/T USP47 chr11:11862970-11980870:+ 0.76 6.13 2.16E-9 Box Plot
BLCA rs10741782 chr11:19613111 C/T ZBED5 chr11:10833621-10880343:- 0.6 5.95 5.98E-9 Box Plot
BLCA rs10742084 chr11:3647294 A/G TSSC4 chr11:2421718-2425108:+ 0.47 6.19 1.56E-9 Box Plot
BLCA rs10742302 chr11:33671277 A/G ATP5EP2 chr13:28519343-28519727:+ 0.33 6.21 1.34E-9 Box Plot
BLCA rs10742302 chr11:33671277 A/G LOC100130932 chr19:14599758-14600688:+ 0.34 6.24 1.14E-9 Box Plot
BLCA rs10742302 chr11:33671277 A/G RPL13AP3 chr14:56232895-56234435:+ 0.33 6.56 1.7E-10 Box Plot
BLCA rs10742302 chr11:33671277 A/G RPL19P12 chr7:102781796-102782386:- 0.34 6.08 2.91E-9 Box Plot
BLCA rs10742830 chr11:48116232 A/G AMBRA1 chr11:46417964-46615675:- 0.66 6.55 1.91E-10 Box Plot
BLCA rs10756160 chr9:11016456 A/G KIAA0020 chr9:2720469-2844241:- 0.55 6.02 4.17E-9 Box Plot
BLCA rs10781390 chr9:79502986 A/G ANXA2P3 chr10:66585329-66586336:+ 0.32 6.26 1.04E-9 Box Plot
BLCA rs10781390 chr9:79502986 A/G ATP5EP2 chr13:28519343-28519727:+ 0.34 6.58 1.52E-10 Box Plot
BLCA rs10781390 chr9:79502986 A/G LOC100130932 chr19:14599758-14600688:+ 0.34 6.45 3.34E-10 Box Plot
BLCA rs10781390 chr9:79502986 A/G RPL13AP3 chr14:56232895-56234435:+ 0.35 7.42 7.77E-13 Box Plot
BLCA rs10781390 chr9:79502986 A/G RPL19P12 chr7:102781796-102782386:- 0.35 6.58 1.52E-10 Box Plot
BLCA rs1078679 chr6:26568741 C/T ZNF322B chr9:99957633-99961910:- 0.46 8.07 9.07E-15 Box Plot